XmlmmCIF equivalent: pdbx_refine_tls
Data items in the REFINE_TLS category record details about
TLS parameters used in structure refinement. Note that the
intention is primarily to describe directly refined TLS
parameters, although other methods of obtaining TLS parameters
may be covered, see item _pdbx_refine_tls.method
XmlmmCIF equivalent: pdbx_refine_tls/L11
The [1][1] element of the libration tensor L. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
XmlmmCIF equivalent: pdbx_refine_tls/L11_esd
The estimated standard deviation of _pdbx_refine_tls.L[1][1].
XmlmmCIF equivalent: pdbx_refine_tls/L12
The [1][2] element of the libration tensor L. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
XmlmmCIF equivalent: pdbx_refine_tls/L12_esd
The estimated standard deviation of _pdbx_refine_tls.L[1][2].
XmlmmCIF equivalent: pdbx_refine_tls/L13
The [1][3] element of the libration tensor L. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
XmlmmCIF equivalent: pdbx_refine_tls/L13_esd
The estimated standard deviation of _pdbx_refine_tls.L[1][3].
XmlmmCIF equivalent: pdbx_refine_tls/L22
The [2][2] element of the libration tensor L. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
XmlmmCIF equivalent: pdbx_refine_tls/L22_esd
The estimated standard deviation of _pdbx_refine_tls.L[2][2].
XmlmmCIF equivalent: pdbx_refine_tls/L23
The [2][3] element of the libration tensor L. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
XmlmmCIF equivalent: pdbx_refine_tls/L23_esd
The estimated standard deviation of _pdbx_refine_tls.L[2][3].
XmlmmCIF equivalent: pdbx_refine_tls/L33
The [3][3] element of the libration tensor L. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
XmlmmCIF equivalent: pdbx_refine_tls/L33_esd
The estimated standard deviation of _pdbx_refine_tls.L[3][3].
XmlmmCIF equivalent: pdbx_refine_tls/S11
The [1][1] element of the screw-rotation tensor S. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
The trace of S is indeterminate by crystallography, and should
be set to zero.
XmlmmCIF equivalent: pdbx_refine_tls/S11_esd
The estimated standard deviation of _pdbx_refine_tls.S[1][1].
XmlmmCIF equivalent: pdbx_refine_tls/S12
The [1][2] element of the screw-rotation tensor S. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
If the origin is omitted, it is assumed to be the centre of
reaction of the group, in which case S must be symmetric
XmlmmCIF equivalent: pdbx_refine_tls/S12_esd
The estimated standard deviation of _pdbx_refine_tls.S[1][2].
XmlmmCIF equivalent: pdbx_refine_tls/S13
The [1][3] element of the screw-rotation tensor S. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
If the origin is omitted, it is assumed to be the centre of
reaction of the group, in which case S must be symmetric
XmlmmCIF equivalent: pdbx_refine_tls/S13_esd
The estimated standard deviation of _pdbx_refine_tls.S[1][3].
XmlmmCIF equivalent: pdbx_refine_tls/S21
The [2][1] element of the screw-rotation tensor S. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
If the origin is omitted, it is assumed to be the centre of
reaction of the group, in which case S must be symmetric
XmlmmCIF equivalent: pdbx_refine_tls/S21_esd
The estimated standard deviation of _pdbx_refine_tls.S[2][1].
XmlmmCIF equivalent: pdbx_refine_tls/S22
The [2][2] element of the screw-rotation tensor S. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
The trace of S is indeterminate by crystallography, and should
be set to zero.
XmlmmCIF equivalent: pdbx_refine_tls/S22_esd
The estimated standard deviation of _pdbx_refine_tls.S[2][2].
XmlmmCIF equivalent: pdbx_refine_tls/S23
The [2][3] element of the screw-rotation tensor S. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
If the origin is omitted, it is assumed to be the centre of
reaction of the group, in which case S must be symmetric
XmlmmCIF equivalent: pdbx_refine_tls/S23_esd
The estimated standard deviation of _pdbx_refine_tls.S[2][3].
XmlmmCIF equivalent: pdbx_refine_tls/S31
The [3][1] element of the screw-rotation tensor S. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
If the origin is omitted, it is assumed to be the centre of
reaction of the group, in which case S must be symmetric
XmlmmCIF equivalent: pdbx_refine_tls/S31_esd
The estimated standard deviation of _pdbx_refine_tls.S[3][1].
XmlmmCIF equivalent: pdbx_refine_tls/S32
The [3][2] element of the screw-rotation tensor S. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
If the origin is omitted, it is assumed to be the centre of
reaction of the group, in which case S must be symmetric
XmlmmCIF equivalent: pdbx_refine_tls/S32_esd
The estimated standard deviation of _pdbx_refine_tls.S[3][2].
XmlmmCIF equivalent: pdbx_refine_tls/S33
The [3][3] element of the screw-rotation tensor S. This should
be given in the same coordinate frame as the
corresponding anisotropic displacement parameters.
The trace of S is indeterminate by crystallography, and should
be set to zero.
XmlmmCIF equivalent: pdbx_refine_tls/S33_esd
The estimated standard deviation of _pdbx_refine_tls.S[3][3].
XmlmmCIF equivalent: pdbx_refine_tls/T11
The [1][1] element of the translation tensor T. This should
be given in the same coordinate frame and units as the
corresponding anisotropic displacement parameters.
XmlmmCIF equivalent: pdbx_refine_tls/T11_esd
The estimated standard deviation of _pdbx_refine_tls.T[1][1].
XmlmmCIF equivalent: pdbx_refine_tls/T12
The [1][2] element of the translation tensor T. This should
be given in the same coordinate frame and units as the
corresponding anisotropic displacement parameters.
XmlmmCIF equivalent: pdbx_refine_tls/T12_esd
The estimated standard deviation of _pdbx_refine_tls.T[1][2].
XmlmmCIF equivalent: pdbx_refine_tls/T13
The [1][3] element of the translation tensor T. This should
be given in the same coordinate frame and units as the
corresponding anisotropic displacement parameters.
XmlmmCIF equivalent: pdbx_refine_tls/T13_esd
The estimated standard deviation of _pdbx_refine_tls.T[1][3].
XmlmmCIF equivalent: pdbx_refine_tls/T22
The [2][2] element of the translation tensor T. This should
be given in the same coordinate frame and units as the
corresponding anisotropic displacement parameters.
XmlmmCIF equivalent: pdbx_refine_tls/T22_esd
The estimated standard deviation of _pdbx_refine_tls.T[2][2].
XmlmmCIF equivalent: pdbx_refine_tls/T23
The [2][3] element of the translation tensor T. This should
be given in the same coordinate frame and units as the
corresponding anisotropic displacement parameters.
XmlmmCIF equivalent: pdbx_refine_tls/T23_esd
The estimated standard deviation of _pdbx_refine_tls.T[2][3].
XmlmmCIF equivalent: pdbx_refine_tls/T33
The [3][3] element of the translation tensor T. This should
be given in the same coordinate frame and units as the
corresponding anisotropic displacement parameters.
XmlmmCIF equivalent: pdbx_refine_tls/T33_esd
The estimated standard deviation of _pdbx_refine_tls.T[3][3].
XmlmmCIF equivalent: pdbx_refine_tls/details
A description of the TLS group, such as a domain name or a
chemical group name.
XmlmmCIF equivalent: pdbx_refine_tls/method
The method by which the TLS parameters were obtained.
XmlmmCIF equivalent: pdbx_refine_tls/origin_x
The x coordinate in angstroms of the origin to which the
TLS parameters are referred, specified according to
a set of orthogonal Cartesian axes related to the cell axes as
given in _atom_sites.Cartn_transform_axes.
If the origin is omitted, it is assumed to be the centre of
reaction of the group, in which case S must be symmetric
XmlmmCIF equivalent: pdbx_refine_tls/origin_y
The y coordinate in angstroms of the origin to which the
TLS parameters are referred, specified according to
a set of orthogonal Cartesian axes related to the cell axes as
given in _atom_sites.Cartn_transform_axes.
If the origin is omitted, it is assumed to be the centre of
reaction of the group, in which case S must be symmetric
XmlmmCIF equivalent: pdbx_refine_tls/origin_z
The z coordinate in angstroms of the origin to which the
TLS parameters are referred, specified according to
a set of orthogonal Cartesian axes related to the cell axes as
given in _atom_sites.Cartn_transform_axes.
If the origin is omitted, it is assumed to be the centre of
reaction of the group, in which case S must be symmetric
XmlmmCIF equivalent: pdbx_refine_tls/id
The value of _pdbx_refine_tls.id must uniquely identify a record in
the PDBX_REFINE_TLS list.
Note that this item need not be a number; it can be any unique
identifier.